Serveur d'exploration SRAS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Differential virological diagnosis of acute respiratory infections in suspect SARS patients.

Identifieur interne : 000363 ( France/Analysis ); précédent : 000362; suivant : 000364

Differential virological diagnosis of acute respiratory infections in suspect SARS patients.

Auteurs : Martine Valette [France] ; Bruno Lina [France]

Source :

RBID : pubmed:32288141

Abstract

The NIC in Lyon has been involved in the virological diagnosis of suspect severe acute respiratory syndrome (SARS) patients. In March, the French medical authorities organized a medical surveillance of the medical staff who had returned from the French hospital in Hanoi. Each person presenting or not with respiratory symptoms was sampled systematically by the nearest general practitioner (GP) belonging to the influenza network surveillance in the community called GROG and the samples were sent to the NICs located either in Paris or in Lyon. We also received samples from patients hospitalized in the south of France suffering from acute respiratory infection soon after a journey in Asia. We implemented a PCR diagnosis for the human respiratory viruses: influenza A and B, Parainfluenza (Type 1 to Type 4), Metapneumovirus, RSV, Rhinovirus, Enterovirus, Adenovirus. In April, we set up the PCR detection of the SARS-associated coronavirus Urbani strain. The practitioners performed respiratory samples. From 14 March to 15 May we received and tested 88 respiratory samples, respectively, 19 were realized by GPs from the community network and 69 came from hospitalized patients. We never detected the urbani coronavirus strain. However, we detected respiratory viruses in 24% of the cases: the most frequent virus was influenza A H3N2 (11%) and Parainfluenza type 3 (8%). RSV, influenza A H1N1 and Rhinovirus were also detected 2, 1 and 1 cases, respectively. All the positive samples except the rhinovirus came from hospitalized patients. The patients were sampled once and all of them recovered rapidly.

DOI: 10.1016/j.ics.2004.02.161
PubMed: 32288141


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

pubmed:32288141

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Differential virological diagnosis of acute respiratory infections in suspect SARS patients.</title>
<author>
<name sortKey="Valette, Martine" sort="Valette, Martine" uniqKey="Valette M" first="Martine" last="Valette">Martine Valette</name>
<affiliation wicri:level="3">
<nlm:affiliation>National Influenza Center Lyon, Laboratory of Virology - Hospices Civils de Lyon, 8 Avenue Rockefeller, 69373 Lyon Cedex 08, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>National Influenza Center Lyon, Laboratory of Virology - Hospices Civils de Lyon, 8 Avenue Rockefeller, 69373 Lyon Cedex 08</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Auvergne-Rhône-Alpes</region>
<region type="old region" nuts="2">Rhône-Alpes</region>
<settlement type="city">Lyon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Lina, Bruno" sort="Lina, Bruno" uniqKey="Lina B" first="Bruno" last="Lina">Bruno Lina</name>
<affiliation wicri:level="3">
<nlm:affiliation>National Influenza Center Lyon, Laboratory of Virology - Hospices Civils de Lyon, 8 Avenue Rockefeller, 69373 Lyon Cedex 08, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>National Influenza Center Lyon, Laboratory of Virology - Hospices Civils de Lyon, 8 Avenue Rockefeller, 69373 Lyon Cedex 08</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Auvergne-Rhône-Alpes</region>
<region type="old region" nuts="2">Rhône-Alpes</region>
<settlement type="city">Lyon</settlement>
</placeName>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2004">2004</date>
<idno type="RBID">pubmed:32288141</idno>
<idno type="pmid">32288141</idno>
<idno type="doi">10.1016/j.ics.2004.02.161</idno>
<idno type="wicri:Area/PubMed/Corpus">002D72</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002D72</idno>
<idno type="wicri:Area/PubMed/Curation">002D72</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">002D72</idno>
<idno type="wicri:Area/PubMed/Checkpoint">002D39</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">002D39</idno>
<idno type="wicri:Area/Ncbi/Merge">003978</idno>
<idno type="wicri:Area/Ncbi/Curation">003978</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">003978</idno>
<idno type="wicri:doubleKey">0531-5131:2004:Valette M:differential:virological:diagnosis</idno>
<idno type="wicri:Area/Main/Merge">005806</idno>
<idno type="wicri:Area/Main/Curation">005384</idno>
<idno type="wicri:Area/Main/Exploration">005384</idno>
<idno type="wicri:Area/France/Extraction">000363</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Differential virological diagnosis of acute respiratory infections in suspect SARS patients.</title>
<author>
<name sortKey="Valette, Martine" sort="Valette, Martine" uniqKey="Valette M" first="Martine" last="Valette">Martine Valette</name>
<affiliation wicri:level="3">
<nlm:affiliation>National Influenza Center Lyon, Laboratory of Virology - Hospices Civils de Lyon, 8 Avenue Rockefeller, 69373 Lyon Cedex 08, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>National Influenza Center Lyon, Laboratory of Virology - Hospices Civils de Lyon, 8 Avenue Rockefeller, 69373 Lyon Cedex 08</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Auvergne-Rhône-Alpes</region>
<region type="old region" nuts="2">Rhône-Alpes</region>
<settlement type="city">Lyon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Lina, Bruno" sort="Lina, Bruno" uniqKey="Lina B" first="Bruno" last="Lina">Bruno Lina</name>
<affiliation wicri:level="3">
<nlm:affiliation>National Influenza Center Lyon, Laboratory of Virology - Hospices Civils de Lyon, 8 Avenue Rockefeller, 69373 Lyon Cedex 08, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>National Influenza Center Lyon, Laboratory of Virology - Hospices Civils de Lyon, 8 Avenue Rockefeller, 69373 Lyon Cedex 08</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Auvergne-Rhône-Alpes</region>
<region type="old region" nuts="2">Rhône-Alpes</region>
<settlement type="city">Lyon</settlement>
</placeName>
</affiliation>
</author>
</analytic>
<series>
<title level="j">International congress series</title>
<idno type="ISSN">0531-5131</idno>
<imprint>
<date when="2004" type="published">2004</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">The NIC in Lyon has been involved in the virological diagnosis of suspect severe acute respiratory syndrome (SARS) patients. In March, the French medical authorities organized a medical surveillance of the medical staff who had returned from the French hospital in Hanoi. Each person presenting or not with respiratory symptoms was sampled systematically by the nearest general practitioner (GP) belonging to the influenza network surveillance in the community called GROG and the samples were sent to the NICs located either in Paris or in Lyon. We also received samples from patients hospitalized in the south of France suffering from acute respiratory infection soon after a journey in Asia. We implemented a PCR diagnosis for the human respiratory viruses: influenza A and B, Parainfluenza (Type 1 to Type 4), Metapneumovirus, RSV, Rhinovirus, Enterovirus, Adenovirus. In April, we set up the PCR detection of the SARS-associated coronavirus Urbani strain. The practitioners performed respiratory samples. From 14 March to 15 May we received and tested 88 respiratory samples, respectively, 19 were realized by GPs from the community network and 69 came from hospitalized patients. We never detected the urbani coronavirus strain. However, we detected respiratory viruses in 24% of the cases: the most frequent virus was influenza A H3N2 (11%) and Parainfluenza type 3 (8%). RSV, influenza A H1N1 and Rhinovirus were also detected 2, 1 and 1 cases, respectively. All the positive samples except the rhinovirus came from hospitalized patients. The patients were sampled once and all of them recovered rapidly.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>France</li>
</country>
<region>
<li>Auvergne-Rhône-Alpes</li>
<li>Rhône-Alpes</li>
</region>
<settlement>
<li>Lyon</li>
</settlement>
</list>
<tree>
<country name="France">
<region name="Auvergne-Rhône-Alpes">
<name sortKey="Valette, Martine" sort="Valette, Martine" uniqKey="Valette M" first="Martine" last="Valette">Martine Valette</name>
</region>
<name sortKey="Lina, Bruno" sort="Lina, Bruno" uniqKey="Lina B" first="Bruno" last="Lina">Bruno Lina</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/France/Analysis
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000363 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/France/Analysis/biblio.hfd -nk 000363 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    SrasV1
   |flux=    France
   |étape=   Analysis
   |type=    RBID
   |clé=     pubmed:32288141
   |texte=   Differential virological diagnosis of acute respiratory infections in suspect SARS patients.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/France/Analysis/RBID.i   -Sk "pubmed:32288141" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/France/Analysis/biblio.hfd   \
       | NlmPubMed2Wicri -a SrasV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 28 14:49:16 2020. Site generation: Sat Mar 27 22:06:49 2021